BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G08LP1|AL428610
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1290 1699 0.0
>3x_Contig1290
Length = 6501
Score = 1699 bits (854), Expect = 0.0
Identities = 868/876 (99%)
Strand = Plus / Minus
Query: 1 atctattttaatgtttcgtatatagcagctaaccgcctccccaattataagcaaccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 atctattttaatgtttcgtatatagcagctaaccgcctccccaattataagcaaccatgg 818
Query: 61 ctattaatatggcatctctgaattgattcaattactctcgattctgatacttctttcacc 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ctattaatatggcaattctgaattgattcaattactctcgattctgatacttctttcacc 758
Query: 121 aaaatatgttactgtttataaatttccccatggaaaatgacatttcgtcttcttttatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aaaatatgttactgtttataaatttccccatggaaaatgacatttcgtcttcttttatat 698
Query: 181 atttttatcaaggttcagcggttaaaaacaaacagaagaagaaccatcatcacatcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 atttttatcaaggttcagcggttaaaaacaaacagaagaagaaccatcatcacatcaaag 638
Query: 241 acatcagcttcaattaagtctattaamaggttcaaataattcaacatggccccaggtaag 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 637 acatcagcttcaattaagtctattaaaaggttcaaataattcaacatggccccaggtaag 578
Query: 301 aataccgtttcgcttgccgagaaaaaagcacgtatcctaaggtttttccaagaagaacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aataccgtttcgcttgccgagaaaaaagcacgtatcctaaggtttttccaagaagaacat 518
Query: 361 accgtatacaacatgaaggaattagagaaatatatccccaagaaatgtggcatatcttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 accgtatacaacatgaaggaattagagaaatatatccccaagaaatgtggcatatcttcc 458
Query: 421 atgttagtgaaggtattagtacaaaagatgattgatgaagatggattgatcagtgtggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atgttagtgaaggtattagtacaaaagatgattgatgaagatggattgatcagtgtggaa 398
Query: 481 aagtgtgggaacattaacgtgtattggtctttcaaaaatcagatgcmaaatmagttgaat 540
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 397 aagtgtgggaacattaacgtgtattggtctttcaaaaatcagatgcaaaataagttgaat 338
Query: 541 agcgacgccagtvacatagagaaaagaatagagcatgagaaaagtgaaattgctcggtgt 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcgacgccagtaacatagagaaaagaatagagcatgagaaaagtgaaattgctcggtgt 278
Query: 601 cagggattgtatcagamggaaattcaaggccagaggagtgatacgttgaagaatagacgc 660
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 caggaattgtatcagaaggaaattcaaggccagaggagtgatacgttgaagaatagacgc 218
Query: 661 ggctggaaaagaagtgcacagctaagtaaattgaaagaggttcaaaagacaattcgtgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ggctggaaaagaagtgcacagctaagtaaattgaaagaggttcaaaagacaattcgtgaa 158
Query: 721 ttgaactccaaatatgaagaattatccaaaaataactggactccacagcgcatcaaacag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttgaactccaaatatgaagaattatccaaaaataactggactccacagcgcatcaaacag 98
Query: 781 gagaaacataatttgtttgaaaaggcaagttttgctgtaggtcttgcagataacattgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gagaaacataatttgtttgaaaaggcaagttttgctgtaggtcttgcagataacattgat 38
Query: 841 tgcatcactgggcatatctcatctacgtattgtgtt 876
||||||||||||||||||||||||||||||||||||
Sbjct: 37 tgcatcactgggcatatctcatctacgtattgtgtt 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8251
Number of Sequences: 1807
Number of extensions: 8251
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)